Parse Biosciences provides a pipeline that can be run on a Linux operating system, either locally or on a server. The pipeline takes FASTQ files and delivers processed data in the form of a cell-gene count matrix, which serves as the input for various open source tools such as Scanpy and Seurat. The pipeline also delivers an experimental summary report with run statistics.
How can customers download the analysis pipeline?
The pipeline is available to all Parse customers. For customers who have a verified customer support suite account, the pipeline download can be accessed here: Pipeline Download (Current Version).
If you are a current customer, and do not have access to the pipeline download, please fill out your contact information in the form below and access will be provided within 2 business days with an email confirmation.
Note: If you are not a current customer, and are interested in performing a Parse assay or learning more about our analysis pipeline, please reach out to us at email@example.com.